PXD021137

PXD021137 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	PROTEOMIC IDENTIFICATION OF SYSTEMIC BIOMARKERS IN RAT MODELS OF SPINAL CORD INJURY
Description	Biomarkers to more accurately determine severity and prognosis following spinal cord injury (SCI) are needed to ensure that patients are assigned to the most suitable treatment and rehabilitation regimes. This study aimed to characterise the blood proteome following SCI in clinical rat injury models to identify novel candidate biomarkers and altered biological pathways.
HostingRepository	PRIDE
AnnounceDate	2022-05-19
AnnouncementXML	Submission_2022-05-19_09:13:35.591.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sally Shirran
SpeciesList	scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116;
ModificationList	iTRAQ4plex-116 reporter+balance reagent acylated residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-08-26 04:28:26	ID requested
⏵ 1	2022-05-19 09:13:36	announced

Publication List

Hulme CH, Fuller HR, Riddell J, Shirran SL, Botting CH, Osman A, Wright KT, Investigation of the blood proteome in response to spinal cord injury in rodent models. Spinal Cord, 60(4):320-325(2022) [pubmed]

Hulme CH, Fuller HR, Riddell J, Shirran SL, Botting CH, Osman A, Wright KT, Investigation of the blood proteome in response to spinal cord injury in rodent models. Spinal Cord, 60(4):320-325(2022) [pubmed]

Keyword List

submitter keyword: Spinal cord injury
SCI
iTRAQ proteomics
complete transection SCI
contusion SCI

submitter keyword: Spinal cord injury

SCI

iTRAQ proteomics

complete transection SCI

contusion SCI

Contact List

Karina T. Wright
contact affiliation	1. School of Pharmacy and Bioengineering, Keele University, Keele, Staffordshire, UK 2. Midlands Centre for Spinal Injuries, RJAH Orthopaedic Hospital, Oswestry, Shropshire, UK.
contact email	karina.wright1@nhs.net
lab head
Sally Shirran
contact affiliation	University of St Andrews
contact email	ss101@st-andrews.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD021137
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD021137

PRIDE project URI

Repository Record List

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