PXD020976

PXD020976 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Tandem mass spectrometry proteotyping of microbial samples isolated from an industrial infrastructure.
Description	Tandem mass spectrometry proteotyping of microbial samples isolated from an industrial infrastructure for identifying their species taxonomical rank.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_02:56:53.146.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD020976
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Limnobacter thiooxidans; NCBI TaxID: 131080; scientific name: Nevskia ramosa; NCBI TaxID: 64002; scientific name: Ralstonia pickettii; NCBI TaxID: 329; scientific name: Cordyceps confragosa; NCBI TaxID: 1105325;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-08-18 06:28:49	ID requested
⏵ 1	2021-09-09 02:56:54	announced

Publication List

Hayoun K, Pible O, Petit P, Allain F, Jouffret V, Culotta K, Rivasseau C, Armengaud J, Alpha-Bazin B, Proteotyping Environmental Microorganisms by Phylopeptidomics: Case Study Screening Water from a Radioactive Material Storage Pool. Microorganisms, 8(10):(2020) [pubmed]

Hayoun K, Pible O, Petit P, Allain F, Jouffret V, Culotta K, Rivasseau C, Armengaud J, Alpha-Bazin B, Proteotyping Environmental Microorganisms by Phylopeptidomics: Case Study Screening Water from a Radioactive Material Storage Pool. Microorganisms, 8(10):(2020) [pubmed]

Keyword List

submitter keyword: Proteotyping, Bacteria, Eukaryote, Fungus, Proteomics, LC-MSMS, Taxonomy

submitter keyword: Proteotyping, Bacteria, Eukaryote, Fungus, Proteomics, LC-MSMS, Taxonomy

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD020976
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD020976

PRIDE project URI

Repository Record List

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