PXD020780

PXD020780 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Identification of proteins associated with the decapping complex and the endonuclease DNE1 in Arabidopsis
Description	In this work, we used an unbiased approach coupling immunoprecipitations (IPs) and mass spectrometry to define the interactome of the decapping activator DCP1 and the decapping enzyme DCP2. In addition we unravel the interactome of the endonuclease DNE1 harboring an endoribonuclease domain of the NYN family.
HostingRepository	PRIDE
AnnounceDate	2021-11-16
AnnouncementXML	Submission_2021-11-16_04:21:25.346.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Lauriane Kuhn
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-08-06 23:17:14	ID requested
⏵ 1	2021-11-16 04:21:25	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: mRNA Decapping, DCP1, DNE1, RNA degradation, NYN domain, P-bodies, Proteome, Mass spectrometry

submitter keyword: mRNA Decapping, DCP1, DNE1, RNA degradation, NYN domain, P-bodies, Proteome, Mass spectrometry

Contact List

Damien Garcia
contact affiliation	Institut de biologie moléculaire des plantes, CNRS, Université de Strasbourg, Strasbourg, France
contact email	damien.garcia@ibmp-cnrs.unistra.fr
lab head
Lauriane Kuhn
contact affiliation	CNRS, IBMC, FRC1589
contact email	l.kuhn@ibmc-cnrs.unistra.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD020780
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD020780

PRIDE project URI

Repository Record List

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