PXD020685

PXD020685 is an original dataset announced via ProteomeXchange.

Title	Single cell glycosylation analysis (ScSUGAR-seq)
Description	Proteomic data of ScSUGAR-seq samples: 1)TMT experiment to confirm changes in glycosylation due to Swainsonine 2)LFQ biotin pull down experiment to assess lectin binding partners 3)LFQ of MGAT1 cell lines assessing glycopeptide and glycoproteome level changes
HostingRepository	PRIDE
AnnounceDate	2021-06-08
AnnouncementXML	Submission_2021-06-07_19:23:04.762.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nichollas Scott
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	complex glycosylation
Instrument	Orbitrap Fusion; Q Exactive; LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2020-08-02 22:08:06	ID requested
⏵ 1	2021-06-07 19:23:05	announced

Kearney CJ, Vervoort SJ, Ramsbottom KM, Todorovski I, Lelliott EJ, Zethoven M, Pijpers L, Martin BP, Semple T, Martelotto L, Trapani JA, Parish IA, Scott NE, Oliaro J, Johnstone RW, SUGAR-seq enables simultaneous detection of glycans, epitopes, and the transcriptome in single cells. Sci Adv, 7(8):(2021) [pubmed]

submitter keyword: Glycosylation, Single Cell, RNA-seq

Professor Ricky Johnstone
contact affiliation	Peter MacCallum Cancer Centre. Head, The Sir Peter MacCallum Department of Oncology, The University of Melbourne.
contact email	ricky.johnstone@petermac.org
lab head
Nichollas Scott
contact affiliation	University of Melbourne
contact email	nichollas.scott@unimelb.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/06/PXD020685

PRIDE project URI

• PRIDE
  1. PXD020685
     1. Label: PRIDE project
     2. Name: Single cell glycosylation analysis (ScSUGAR-seq)