PXD020648

PXD020648 is an original dataset announced via ProteomeXchange.

Title	HepG2 secretome tagged with the sugar analogs GalNAz and GalNAzMe
Description	Chemically modified analogs of GalNAc, termed GalNAz or GalNAzMe, were incorporated in secreted glycoproteins. The compounds contain bioorthogonal, clickable functional groups that allowed for enrichment using biotin. Chemical glycoproteomics was performed after on-bead digestion and cleavage of glycopeptides from the solid support.
HostingRepository	PRIDE
AnnounceDate	2020-09-15
AnnouncementXML	Submission_2020-09-14_22:19:48.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Benjamin Schumann
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	amidated residue; monohydroxylated residue; acetylated residue; complex glycosylation; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2020-07-30 02:12:19	ID requested
1	2020-09-13 22:29:42	announced
⏵ 2	2020-09-14 22:19:48	announced	2020-09-15: Updated project metadata.

Dataset with its publication pending

submitter keyword: mucin, glycosylation, bioorthogonal, chemical proteomics, enrichment, biotin

Benjamin Schumann
contact affiliation	Imperial College London, The Francis Crick Institute
contact email	b.schumann@imperial.ac.uk
lab head
Benjamin Schumann
contact affiliation	Imperial College London, The Francis Crick Institute
contact email	b.schumann@imperial.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD020648

PRIDE project URI

• PRIDE
  1. PXD020648
     1. Label: PRIDE project
     2. Name: HepG2 secretome tagged with the sugar analogs GalNAz and GalNAzMe