PXD020025

PXD020025 is an original dataset announced via ProteomeXchange.

Title	Grad-Seq analysis of a photosynthetic bacterium rich in internal membrane systems
Description	Here we analyzed the full ensemble of cellular RNAs and co-fractionating proteins using gradient profiling by sequencing (Grad-seq) in Synechocystis 6803, a cyanobacterium rich in internal membrane systems.
HostingRepository	PRIDE
AnnounceDate	2022-02-15
AnnouncementXML	Submission_2022-02-15_13:19:18.822.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Philipp Spaet
SpeciesList	scientific name: Synechocystis sp. PCC 6803; NCBI TaxID: 1148;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-06-25 18:28:52	ID requested
⏵ 1	2022-02-15 13:19:19	announced

Riediger M, Sp, ä, t P, Bilger R, Voigt K, Ma, č, ek B, Hess WR, Analysis of a photosynthetic cyanobacterium rich in internal membrane systems via gradient profiling by sequencing (Grad-seq). Plant Cell, 33(2):248-269(2021) [pubmed]

submitter keyword: cyanobacteria, post-transcriptional regulation, ribonucleoprotein complexes, RNA-binding proteins, small regulatory RNAs

Wolfgang R Hess
contact affiliation	Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany
contact email	wolfgang.hess@biologie.uni-freiburg.de
lab head
Philipp Spaet
contact affiliation	University Tuebingen Department of Quantitative Proteomics
contact email	philipp.spaet@uni-tuebingen.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD020025

PRIDE project URI

• PRIDE
  1. PXD020025
     1. Label: PRIDE project
     2. Name: Grad-Seq analysis of a photosynthetic bacterium rich in internal membrane systems