PXD019906

PXD019906 is an original dataset announced via ProteomeXchange.

Title	Proteins associated with Cdc48A identified by LC-MS\MS data
Description	His6-Cdc48a and associated proteins purified from H. volcanii. A) SDS- PAGE of proteins purified by Ni2+ -chromatography. H. volcanii carrying empty vector control (H1209-pJAM202c, lane 1) and ectopically expressing His6-Cdc48a (H1209- pJAM1409, lane 2). Red bars indicate regions of gel excised. B) Proteins identified in gel slices by LC-MS/MS analysis. Criteria for protein inclusion: FDR < 0.01%, normalized total spectra minus control > 50, protein threshold > 99% and 2 peptide minimum. Based on spectral counting, Cdc48a and DUF111 were most abundant in regions (a) and (b), respectively, as indicated. DHS1, deoxyhypusine synthase. DUF111, Cdc48a gene neighbor of unknown function. TnaA, tryptophanase; Rps3, ribosomal protein S3; n.d., not detected.
HostingRepository	PRIDE
AnnounceDate	2023-06-22
AnnouncementXML	Submission_2023-06-22_14:33:19.932.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD019906
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	SwathiDantuluri
SpeciesList	scientific name: Haloferax volcanii DS2; NCBI TaxID: 309800;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap XL

Revision	Datetime	Status	ChangeLog Entry
0	2020-06-19 06:28:18	ID requested
⏵ 1	2023-06-22 14:33:20	announced

10.6019/PXD019906;

submitter keyword: Cdc48A, HVO_2380

JulieMaupin-Furlow
contact affiliation	Professor,Microbiology and Cell Science Department, University Of Florida, USA.
contact email	jmaupin@ufl.edu
lab head
SwathiDantuluri
contact affiliation	Memorial Sloan Kettering Cancer CE
contact email	dantulus@mskcc.org
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/06/PXD019906

PRIDE project URI

• PRIDE
  1. PXD019906
     1. Label: PRIDE project
     2. Name: Proteins associated with Cdc48A identified by LC-MS\MS data