PXD019504

PXD019504 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Global proteome analysis of paired colorectal cancer sample using LC-MS/MS
Description	To find differentially expressed protein in colorectal cancer compared with normal colon tissue, we performed global proteome analysis using LC-MS.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:13:04.430.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Atsushi Tanaka
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-06-01 18:24:59	ID requested
1	2020-09-29 23:59:06	announced
⏵ 2	2024-10-22 05:13:12	announced	2024-10-22: Updated project metadata.

Publication List

10.18632/oncotarget.27491;
Tanaka A, Zhou Y, Shia J, Ginty F, Ogawa M, Klimstra DS, Hendrickson RC, Wang JY, Roehrl MH, Prolyl 4-hydroxylase alpha 1 protein expression risk-stratifies early stage colorectal cancer. Oncotarget, 11(8):813-824(2020) [pubmed]

10.18632/oncotarget.27491;

Tanaka A, Zhou Y, Shia J, Ginty F, Ogawa M, Klimstra DS, Hendrickson RC, Wang JY, Roehrl MH, Prolyl 4-hydroxylase alpha 1 protein expression risk-stratifies early stage colorectal cancer. Oncotarget, 11(8):813-824(2020) [pubmed]

Keyword List

submitter keyword: cancer, label-free,human

submitter keyword: cancer, label-free,human

Contact List

Michael Roehrl
contact affiliation	Department of pathology, Memorial Sloan Kettering Cancer Center
contact email	roehrlm@mskcc.org
lab head
Atsushi Tanaka
contact affiliation	Beth Israel Deaconess Medical Center
contact email	a.tanaka121@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD019504
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD019504

PRIDE project URI

Repository Record List

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