PXD019313 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | histone modification signatures in mice melanoma progression |
Description | In the search for the biological mechanisms that underlie melanoma development, we have developed a cellular system that models tumor initiation and transformation from melanocytes to metastatic melanoma cells.. To evaluate histone PTM, we applied a workflow to globally detect histone PTM by mass spectrometry approaches allowing the interrogation of more than 40 PTMs sites and 200 PTMs combinations. |
HostingRepository | PRIDE |
AnnounceDate | 2021-09-09 |
AnnouncementXML | Submission_2021-09-08_23:22:31.218.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Julia Cunha |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | monomethylated residue; trimethylated residue; phosphorylated residue; acetylated residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-05-20 17:23:04 | ID requested | |
⏵ 1 | 2021-09-08 23:22:32 | announced | |
Publication List
Azevedo H, Pessoa GC, de Luna Vitorino FN, Nsengimana J, Newton-Bishop J, Reis EM, da Cunha JPC, Jasiulionis MG, Gene co-expression and histone modification signatures are associated with melanoma progression, epithelial-to-mesenchymal transition, and metastasis. Clin Epigenetics, 12(1):127(2020) [pubmed] |
Keyword List
submitter keyword: histone, PTM, mice, melanoma |
Contact List
Miriam Galvonas |
contact affiliation | UNIFESP |
contact email | mjasiulionis@gmail.com |
lab head | |
Julia Cunha |
contact affiliation | LCC |
contact email | julia.cunha@butantan.gov.br |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
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- PRIDE
- PXD019313
- Label: PRIDE project
- Name: histone modification signatures in mice melanoma progression