PXD019045

PXD019045 is an original dataset announced via ProteomeXchange.

Title	Human HCC sample, phosphosites occupancy
Description	Improve the reliability of the phosphosite occupancy determined by the third method by comparison of the ratio of absolute occupancy and relative occupancy from HCC samples. An outlier score was introduced to evaluate the deviation between ratio of absolute occupancy and relative occupancy and further to balance the confidence interval and deviation instead of set a fixed threshold.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:10:16.481.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Wang Yan
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2020-05-07 22:29:33	ID requested
1	2020-08-05 22:51:18	announced
⏵ 2	2024-10-22 05:10:16	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

submitter keyword: QE-HF, phosphoproteome,deep covered human HCC proteome

Wang Yan
contact affiliation	Dalian institute of chemical physics, CAS
contact email	wangyan805@outlook.com
lab head
Wang Yan
contact affiliation	Dalian institute of chemical physics, CAS
contact email	wangyan805@outlook.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/08/PXD019045

PRIDE project URI

• PRIDE
  1. PXD019045
     1. Label: PRIDE project
     2. Name: Human HCC sample, phosphosites occupancy