<<< Full experiment listing

PXD018940

PXD018940 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleEffect of HDAC inhibitors on acetylated histones in P. pacificus
DescriptionWestern Blot showed that epigenetic control of the mouth dimorphism in P. pacificus correlates with histone 4 acetylation. This result was validated by mass spectrometry. This experiment profiled histone acetylation in the presence and absence of the histone deacetylase (HDAC) inhibitor Trichostatin A (TSA). Histone acetylation was also examined in the presence of another HDAC inhibitor (Na-butyrate), which served as an additional negative control because unlike TSA, it did not induce a phenotypic change.
HostingRepositoryPRIDE
AnnounceDate2023-02-24
AnnouncementXMLSubmission_2023-02-24_00:35:41.611.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterNicolasNalpas
SpeciesList scientific name: Pristionchus pacificus; NCBI TaxID: 54126;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive HF-X
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-04-30 16:45:16ID requested
12023-02-24 00:35:41announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: phenotypic plasticity, epigenetics, histones,Pristionchus pacificus
Contact List
Ralf J.Sommer
contact affiliationMax Planck Institute for Developmental Biology, Max-Planck-Ring 5, 72076 Tübingen
contact emailralf.sommer@teubingen.mpg.de
lab head
NicolasNalpas
contact affiliationTuebingen University
contact emailnalpas.nicolas@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/02/PXD018940
PRIDE project URI
Repository Record List
[ + ]