PXD018935

PXD018935 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Structural Analysis of 70S Ribosomes by Cross-Linking/Mass Spectrometry Reveals Conformational Plasticity
Description	We analyzed 143 E. coli ribosomal structures, mapping a total of 10,771 intramolecular distances for 126 cross-link-pairs and 3,405 intermolecular distances for 97 protein pairs. Our study might serve as benchmark for conducting biochemical experiments on newly modeled protein regions, guided by XL-MS.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:10:45.751.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Daniele Ubbiali
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-30 05:29:57	ID requested
1	2020-08-13 04:29:32	announced
⏵ 2	2024-10-22 05:10:46	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/s41598-020-69313-3;
T, ü, ting C, Iacobucci C, Ihling CH, Kastritis PL, Sinz A, Structural analysis of 70S ribosomes by cross-linking/mass spectrometry reveals conformational plasticity. Sci Rep, 10(1):12618(2020) [pubmed]

10.1038/s41598-020-69313-3;

T, ü, ting C, Iacobucci C, Ihling CH, Kastritis PL, Sinz A, Structural analysis of 70S ribosomes by cross-linking/mass spectrometry reveals conformational plasticity. Sci Rep, 10(1):12618(2020) [pubmed]

Keyword List

submitter keyword: Ribosome
cross-linking mass spectrometry

submitter keyword: Ribosome

cross-linking mass spectrometry

Contact List

Andrea Sinz
contact affiliation	Martin-Luther-University Halle-Wittenberg (MLU) Institute of Pharmacy Department of Pharmaceutical Chemistry and Bioanalyitics
contact email	andrea.sinz@pharmazie.uni-halle.de
lab head
Daniele Ubbiali
contact affiliation	Martin Luther University of Halle-Wittenberg
contact email	daniele.ubbiali@pharmazie.uni-halle.de
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/08/PXD018935
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/08/PXD018935

PRIDE project URI

Repository Record List

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