PXD018883 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | ECM of proliferative vs dormant HNSCC |
Description | The goal of this project is to characterize the ECM composition of actively proliferative and dormant head and neck squamous cell carcinoma xenografts and identify components of the ECM niche instructing tumor cell dormancy. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-07 |
AnnouncementXML | Submission_2024-10-07_13:33:41.703.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD018883 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | George Chlipala |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | Deamidated; Oxidation; Carbamidomethyl; iodoacetamide derivatized residue; Gln->pyro-Glu |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-04-28 22:02:02 | ID requested | |
⏵ 1 | 2024-10-07 13:33:42 | announced | |
Publication List
Di Martino JS, Nobre AR, Mondal C, Taha I, Farias EF, Fertig EJ, Naba A, Aguirre-Ghiso JA, Bravo-Cordero JJ, A tumor-derived type III collagen-rich ECM niche regulates tumor cell dormancy. Nat Cancer, 3(1):90-107(2022) [pubmed] |
10.1038/s43018-021-00291-9; |
10.6019/PXD018883; |
Keyword List
submitter keyword: tumor dormacy, xenografts, Head and neck squamous cell carcinoma,Extracellular matrix, tumor microenvironment |
Contact List
Alexandra Naba |
contact affiliation | Department of Physiology and Biophysics, University of Illinois at Chicago |
contact email | anaba@uic.edu |
lab head | |
George Chlipala |
contact affiliation | University of Illinois at Chicago |
contact email | gchlip2@uic.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD018883 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD018883
- Label: PRIDE project
- Name: ECM of proliferative vs dormant HNSCC