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PXD018814

PXD018814 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleExpression profiling of Arabidopsis leaf, flower and fruit development
DescriptionWith the quantitative profiling of consecutive tissue growth stages, we provide a global overview of expression changes of individual genes that play a role in dynamic cellular processes and developmental changes. We used tandem mass tag-based mass spectrometry and RNA sequencing to generate proteomic, phosphoproteomic and transcriptomic expression profiles for rosette leaf, flower and fruit tissue samples of the model plant Arabidopsis thaliana. In doing so, we have generated a multi-omics dataset of progressive changes during the development of three important plant organ types that can be used to study the underlying molecular mechanisms from different angles.
HostingRepositoryPRIDE
AnnounceDate2020-09-15
AnnouncementXMLSubmission_2020-10-19_01:00:11.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterJulia Mergner
SpeciesList scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationListphosphorylated residue
InstrumentQ Exactive HF
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-04-26 17:23:58ID requested
12020-09-14 23:03:59announced
22020-10-19 01:00:12announced2020-10-19: Updated publication reference for PubMed record(s): 33037224.
Publication List
Mergner J, Frejno M, Messerer M, Lang D, Samaras P, Wilhelm M, Mayer KFX, Schwechheimer C, Kuster B, Proteomic and transcriptomic profiling of aerial organ development in Arabidopsis. Sci Data, 7(1):334(2020) [pubmed]
Keyword List
submitter keyword: Arabidopsis, proteomics, phospho, development
Contact List
Bernhard Kuster
contact affiliationTUM
contact emailkuster@tum.de
lab head
Julia Mergner
contact affiliationChair of Proteomics and Bioanalytics, TU Munich
contact emailjulia.mergner@tum.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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