PXD018714 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Data on proteome of Mycoplasma hominis cultivated with arginine or thymidine as a carbon source |
Description | M. hominis cells were grown in liquid medium supplied with arginine or thymidine as a carbon source. LC-MS analysis was performed on Ultimate 3000 Nano LC System (Thermo Fisher Scientific) coupled with Q Exactive HF benchtop Orbitrap mass spectrometer (Thermo Fisher Scientific) via a nanoelectrospray source (Thermo Fisher Scientific), an untargeted label-free bottom-up proteomic strategy was used, DDA (Data Dependent Acquisition) approach. Protein identification and label-free quantification were performed with PEAKS software. |
HostingRepository | PRIDE |
AnnounceDate | 2020-05-06 |
AnnouncementXML | Submission_2020-05-05_22:38:28.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD018714 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Sergey Kovalchuk |
SpeciesList | scientific name: Mycoplasma hominis ATCC 23114; NCBI TaxID: 347256; |
ModificationList | Deamidated; Oxidation; monohydroxylated residue; Carbamidomethyl; iodoacetamide derivatized residue; deamidated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-04-21 08:45:53 | ID requested | |
⏵ 1 | 2020-05-05 22:38:29 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: mycoplasma, hominis, growth conditions, proteome |
Contact List
Olga Pobeguts |
contact affiliation | Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency |
contact email | nikitishena@mail.ru |
lab head | |
Sergey Kovalchuk |
contact affiliation | Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, RAS |
contact email | xerx222@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD018714
- Label: PRIDE project
- Name: Data on proteome of Mycoplasma hominis cultivated with arginine or thymidine as a carbon source