⮝ Full datasets listing

PXD018714

PXD018714 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleData on proteome of Mycoplasma hominis cultivated with arginine or thymidine as a carbon source
DescriptionM. hominis cells were grown in liquid medium supplied with arginine or thymidine as a carbon source. LC-MS analysis was performed on Ultimate 3000 Nano LC System (Thermo Fisher Scientific) coupled with Q Exactive HF benchtop Orbitrap mass spectrometer (Thermo Fisher Scientific) via a nanoelectrospray source (Thermo Fisher Scientific), an untargeted label-free bottom-up proteomic strategy was used, DDA (Data Dependent Acquisition) approach. Protein identification and label-free quantification were performed with PEAKS software.
HostingRepositoryPRIDE
AnnounceDate2020-05-06
AnnouncementXMLSubmission_2020-05-05_22:38:28.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD018714
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterSergey Kovalchuk
SpeciesList scientific name: Mycoplasma hominis ATCC 23114; NCBI TaxID: 347256;
ModificationListDeamidated; Oxidation; monohydroxylated residue; Carbamidomethyl; iodoacetamide derivatized residue; deamidated residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-04-21 08:45:53ID requested
12020-05-05 22:38:29announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: mycoplasma, hominis, growth conditions, proteome
Contact List
Olga Pobeguts
contact affiliationFederal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency
contact emailnikitishena@mail.ru
lab head
Sergey Kovalchuk
contact affiliationShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, RAS
contact emailxerx222@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD018714
PRIDE project URI
Repository Record List
[ + ]