PXD018714

PXD018714 is an original dataset announced via ProteomeXchange.

Title	Data on proteome of Mycoplasma hominis cultivated with arginine or thymidine as a carbon source
Description	M. hominis cells were grown in liquid medium supplied with arginine or thymidine as a carbon source. LC-MS analysis was performed on Ultimate 3000 Nano LC System (Thermo Fisher Scientific) coupled with Q Exactive HF benchtop Orbitrap mass spectrometer (Thermo Fisher Scientific) via a nanoelectrospray source (Thermo Fisher Scientific), an untargeted label-free bottom-up proteomic strategy was used, DDA (Data Dependent Acquisition) approach. Protein identification and label-free quantification were performed with PEAKS software.
HostingRepository	PRIDE
AnnounceDate	2020-05-06
AnnouncementXML	Submission_2020-05-05_22:38:28.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD018714
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Sergey Kovalchuk
SpeciesList	scientific name: Mycoplasma hominis ATCC 23114; NCBI TaxID: 347256;
ModificationList	Deamidated; Oxidation; monohydroxylated residue; Carbamidomethyl; iodoacetamide derivatized residue; deamidated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-21 08:45:53	ID requested
⏵ 1	2020-05-05 22:38:29	announced

Dataset with its publication pending

submitter keyword: mycoplasma, hominis, growth conditions, proteome

Olga Pobeguts
contact affiliation	Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency
contact email	nikitishena@mail.ru
lab head
Sergey Kovalchuk
contact affiliation	Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, RAS
contact email	xerx222@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD018714

PRIDE project URI

• PRIDE
  1. PXD018714
     1. Label: PRIDE project
     2. Name: Data on proteome of Mycoplasma hominis cultivated with arginine or thymidine as a carbon source