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PXD018644

PXD018644 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleActivity-based protein profiling of the mouse gut microbiome in response to high or low fiber diets
DescriptionGastrointestinal content of mice fed high or low fiber diets was labeled with the GH2c-ABP. 3x replicates of each diet, 2x littermates per diet. 12 total mice.
HostingRepositoryPRIDE
AnnounceDate2022-08-11
AnnouncementXMLSubmission_2022-08-11_08:23:46.886.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD018644
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterMatthew Monroe
SpeciesList scientific name: environmental samples; NCBI TaxID: 48479;
ModificationListOxidation
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-04-18 16:14:32ID requested
12022-08-11 08:23:47announced
Publication List
Killinger BJ, Whidbey C, Sadler NC, DeLeon AJ, Munoz N, Kim YM, Wright AT, Activity-based protein profiling identifies alternating activation of enzymes involved in the bifidobacterium shunt pathway or mucin degradation in the gut microbiome response to soluble dietary fiber. NPJ Biofilms Microbiomes, 8(1):60(2022) [pubmed]
Keyword List
submitter keyword: ABPP, mouse, fiber
Contact List
Aaron Wright
contact affiliationPacific Northwest National Laboratory, USA
contact emailAaron.Wright@pnnl.gov
lab head
Matthew Monroe
contact affiliationPacific Northwest National Laboratory
contact emailmatthew.monroe@pnnl.gov
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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