PXD018642

PXD018642 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	gNOMO: an pipeline to integrate meta-omics data analisys of non-model organisms
Description	This set of metaproteomics data of the Gemran cockroach hindgut community and the host has been used to validate the gNOMO pipeline. This pipeline is designed to integrate multiple meta-omics data of non-model organisms.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:28:20.071.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Maria Muñoz-Benavent
SpeciesList	scientific name: Blattella germanica; NCBI TaxID: 6973;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-18 15:33:47	ID requested
1	2021-09-09 01:29:37	announced
⏵ 2	2024-10-22 05:28:22	announced	2024-10-22: Updated project metadata.

Publication List

10.1093/nargab/lqaa058;
Mu, ñ, oz-Benavent M, Hartkopf F, Van Den Bossche T, Piro VC, Garc, í, a-Ferris C, Latorre A, Renard BY, Muth T, gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms. NAR Genom Bioinform, 2(3):lqaa058(2020) [pubmed]

10.1093/nargab/lqaa058;

Mu, ñ, oz-Benavent M, Hartkopf F, Van Den Bossche T, Piro VC, Garc, í, a-Ferris C, Latorre A, Renard BY, Muth T, gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms. NAR Genom Bioinform, 2(3):lqaa058(2020) [pubmed]

Keyword List

submitter keyword: metaproteomics, cockroach, non-model organism, hindgut

submitter keyword: metaproteomics, cockroach, non-model organism, hindgut

Contact List

Amparo Latorre
contact affiliation	I2Sysbio, Universitat de València, Spain
contact email	amparo.latorre@uv.es
lab head
Maria Muñoz-Benavent
contact affiliation	Universitat de Valencia
contact email	mamube2@uv.es
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD018642
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD018642

PRIDE project URI

Repository Record List

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