PXD018303 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Study Samples Dendritic Cell MHC II presentation by LC-MSMS |
Description | MAPPs data was used to construct an artificial neural network (ANN) model for MHC class II antigen presentation. Using Infliximab and Rituximab, the model demonstrated an unprecedented performance for predicting MAPPs and CD4 T cell epitopes, complementing results from MAPPs assays and outperforming conventional prediction models trained on binding affinity data. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:07:34.686.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Eustache Paramithiotis |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; deamidated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-03-31 02:23:49 | ID requested | |
1 | 2020-06-23 22:13:33 | announced | |
⏵ 2 | 2024-10-22 05:07:35 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: LC-MSMS,MHC-associated peptide proteomics (MAPPS), MHC II presentation, dendritic cells |
Contact List
Eustache Paramithiotis |
contact affiliation | Caprion Biosciences Inc. |
contact email | eparamithiotis@caprion.com |
lab head | |
Eustache Paramithiotis |
contact affiliation | Caprion Biosciences Inc. |
contact email | eparamithiotis@caprion.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD018303 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD018303
- Label: PRIDE project
- Name: Study Samples Dendritic Cell MHC II presentation by LC-MSMS