PXD018234

PXD018234 is an original dataset announced via ProteomeXchange.

Title	Al-induced root proteomics changes in stress-acclimated tomato plants
Description	Excess levels of Al3+ become highly harmful to plant roots as the toxic ions bind to the surface of root-tips. Plants can acquire tolerance to stress after multiple generations of exposure to stress conditions. After four consecutive generations of Al treatments (G4Al+ seeds), tomato plants appeared more tolerant to the stress condition. This project used laser capture microdissection (LCM) technology to isolate the Al-sensitive epidermal and outer cortical cells of root-tips. Tandem mass tag (TMT) proteomics analysis was conducted to identify proteomics changes related to the physiological properties in root growth under Al treated conditions.
HostingRepository	PRIDE
AnnounceDate	2022-02-22
AnnouncementXML	Submission_2022-02-21_16:25:19.995.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD018234
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ted Thannhauser
SpeciesList	scientific name: Solanum lycopersicum; NCBI TaxID: 4081;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-27 08:00:53	ID requested
⏵ 1	2022-02-21 16:25:20	announced

Potts J, Li H, Qin Y, Wu X, Hui D, Nasr KA, Zhou S, Yong Y, Fish T, Liu J, Thannhauser TW, Using single cell type proteomics to identify Al-induced proteomes in outer layer cells and interior tissues in the apical meristem/cell division regions of tomato root-tips. J Proteomics, 255():104486(2022) [pubmed]

submitter keyword: Outer cellular layers of root-tips, Laser Capture Microdissection, TMT proteomics, Aluminum toxicity, stress-acclimated tomato plants

Theodore Thannhauser
contact affiliation	USDA-ARS
contact email	tt34@cornell.edu
lab head
Ted Thannhauser
contact affiliation	USDA-ARS
contact email	tt34@cornell.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD018234

PRIDE project URI

• PRIDE
  1. PXD018234
     1. Label: PRIDE project
     2. Name: Al-induced root proteomics changes in stress-acclimated tomato plants