PXD018208

PXD018208 is an original dataset announced via ProteomeXchange.

Title	Glycopeptide Relative Retention Time Prediction
Description	A re-analysis of published data-dependent acquisition glycoproteomics datasets to demonstrate relative retention time prediction on glycopeptide identification and disambiguation of adduct states.
HostingRepository	PRIDE
AnnounceDate	2020-04-01
AnnouncementXML	Submission_2020-04-01_02:40:12.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Joshua Klein
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	N-glycosylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	Orbitrap Fusion Lumos; Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-25 23:52:44	ID requested
⏵ 1	2020-04-01 02:40:13	announced

Klein J, Zaia J, Relative Retention Time Estimation Improves N-Glycopeptide Identifications by LC-MS/MS. J Proteome Res, 19(5):2113-2121(2020) [pubmed]

submitter keyword: Glycoproteomics

Joseph Zaia
contact affiliation	Department of Biochemistry, Boston University Medical School
contact email	jzaia@bu.edu
lab head
Joshua Klein
contact affiliation	Boston University
contact email	joshua.adam.klein@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD018208

PRIDE project URI

• PRIDE
  1. PXD018208
     1. Label: PRIDE project
     2. Name: Glycopeptide Relative Retention Time Prediction