PXD018141

PXD018141 is an original dataset announced via ProteomeXchange.

Title	Identification of RNA binding Proteins in A. thaliana leaves
Description	The goal of this MS project was to identify the RNA binding proteins in Arabidopsis thaliana leaves. To this end RBPs were isolated by a technique termed ‘RNA interactome capture’ and the captured proteins identified by mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:04:32.428.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Farnusch Kaschani
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; acetylated residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-23 01:11:45	ID requested
1	2020-05-26 02:59:49	announced
⏵ 2	2024-10-22 05:04:36	announced	2024-10-22: Updated project metadata.

10.3390/biom10040661;

Bach-Pages M, Homma F, Kourelis J, Kaschani F, Mohammed S, Kaiser M, van der Hoorn RAL, Castello A, Preston GM, Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Biomolecules, 10(4):(2020) [pubmed]

submitter keyword: UV cross linking,RBP, RNA interactome capture, RNA binding proteins

Farnusch Kaschani
contact affiliation	Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
contact email	farnusch.kaschani@uni-due.de
lab head
Farnusch Kaschani
contact affiliation	University Duisburg-Essen
contact email	farnusch.kaschani@uni-due.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD018141

PRIDE project URI

• PRIDE
  1. PXD018141
     1. Label: PRIDE project
     2. Name: Identification of RNA binding Proteins in A. thaliana leaves