PXD018011

PXD018011 is an original dataset announced via ProteomeXchange.

Title	Identification of tomato proteins that interact with Replication initiator protein (Rep) of the geminivirus TYLCV
Description	In this study, an GFP-based affinity purification followed by mass spectrometry (AP-MS) approach is used in order to identify new tomato proteins that interact with the Replication initiator protein (Rep, AL1, C1) from Tomato yellow leaf curl virus (TYLCV).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:08:48.645.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Tomato yellow leaf curl virus; NCBI TaxID: 10832; scientific name: Solanum lycopersicum; NCBI TaxID: 4081;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-12 02:35:59	ID requested
1	2020-07-09 23:13:38	announced
2	2020-08-09 22:57:44	announced	2020-08-10: Updated publication reference for PubMed record(s): 32760417.
⏵ 3	2024-10-22 05:08:52	announced	2024-10-22: Updated project metadata.

10.3389/fpls.2020.01069;

Maio F, Helderman TA, Arroyo-Mateos M, van der Wolf M, Boeren S, Prins M, van den Burg HA, Identification of Tomato Proteins That Interact With Replication Initiator Protein (Rep) of the Geminivirus TYLCV. Front Plant Sci, 11():1069(2020) [pubmed]

submitter keyword: proteomics, Rep, viral replication,Geminivirus, Interactome, TYLCV, PCNA

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/07/PXD018011

PRIDE project URI

• PRIDE
  1. PXD018011
     1. Label: PRIDE project
     2. Name: Identification of tomato proteins that interact with Replication initiator protein (Rep) of the geminivirus TYLCV