PXD017851

PXD017851 is an original dataset announced via ProteomeXchange.

Title	HEK293T cell proteome remodeling upon Torin1 treatment or amino acid withdraw in WT and RPS3-Halo knock-in cells with or without NUFIP1 deletion. Related to Supplementary Table 5 from An et al (2020)
Description	HEK293T proteome (single shot) with knock-in or not for RPS3-Halo and Knock out or not for NUFIP1. Cells were treated or not with Torin1 or deprived of amino acids.
HostingRepository	PRIDE
AnnounceDate	2020-04-30
AnnouncementXML	Submission_2020-07-05_22:48:50.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alban Ordureau
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-03 22:56:52	ID requested
1	2020-04-29 22:23:57	announced
⏵ 2	2020-07-05 22:48:51	announced	2020-07-06: Updated publication reference for PubMed record(s): 32612236.

An H, Ordureau A, K, ö, rner M, Paulo JA, Harper JW, Systematic quantitative analysis of ribosome inventory during nutrient stress. Nature, 583(7815):303-309(2020) [pubmed]

submitter keyword: Human, Proteome, LC-MSMS

Wade Harper
contact affiliation	Department of Cell Biology, Harvard Medical School, Boston MA 02115 USA
contact email	wade_harper@hms.harvard.edu
lab head
Alban Ordureau
contact affiliation	Harvard Medical School, Department of Cell Biology
contact email	alban_ordureau@hms.harvard.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD017851

PRIDE project URI

• PRIDE
  1. PXD017851
     1. Label: PRIDE project
     2. Name: HEK293T cell proteome remodeling upon Torin1 treatment or amino acid withdraw in WT and RPS3-Halo knock-in cells with or without NUFIP1 deletion. Related to Supplementary Table 5 from An et al (2020)