PXD017817

PXD017817 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic characterization of the culture supernatant of Mycobacterium bovis in different growth stages
Description	The goal of this study is to identify the different proteins secreted by Mycobacterium bovis in the culture media at different stages of bacterial growth. A field strain of M. bovis was allowed to grow in a culture media and culture supernatant was collected at three-time points representing approximately three different phases of growth. The supernatant was digested by trypsin and analyzed by LC-MS/MS analysis
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:30:50.094.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nadia Assal
SpeciesList	scientific name: Mycobacterium bovis; NCBI TaxID: 1765; scientific name: Bacteria; NCBI TaxID: NCBITaxon:2;
ModificationList	acetylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-02 02:47:28	ID requested
1	2021-12-30 14:45:46	announced
⏵ 2	2024-10-22 05:30:52	announced	2024-10-22: Updated project metadata.

Publication List

Assal N, Rennie B, Walrond L, Cyr T, Rohonczy L, Lin M, in different growth stages. Biochem Biophys Rep, 28():101154(2021) [pubmed]
10.1016/j.bbrep.2021.101154;

Assal N, Rennie B, Walrond L, Cyr T, Rohonczy L, Lin M, in different growth stages. Biochem Biophys Rep, 28():101154(2021) [pubmed]

10.1016/j.bbrep.2021.101154;

Keyword List

submitter keyword: culture supernatant, secreted proteins,M. bovis, growth stage

submitter keyword: culture supernatant, secreted proteins,M. bovis, growth stage

Contact List

Min Lin
contact affiliation	Canadian Food Inspection Agency, Ottawa laboratory Fallowfield, Canada University of Ottawa, Canada
contact email	min.lin@canada.ca
lab head
Nadia Assal
contact affiliation	Canadian Food Inspection Agency
contact email	assal.nadia@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/12/PXD017817
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/12/PXD017817

PRIDE project URI

Repository Record List

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