<<< Full experiment listing


PXD017719 is an original dataset announced via ProteomeXchange.

Dataset Summary
DescriptionThis dataset consists of 18 raw MS files and associated peak lists and result files, acquired on AB SCIEX 5600 TripleTOF mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Michael Aregger, affinity purification and mass spectrometric acquisition was performed by Zhen-Yuan Lin. Analysis was performed by Anne-Claude Gingras, Cassandra Wong and Zhen-Yuan Lin. The files are associated with a manuscript submitted for publication by Michael Aregger et al. The main goal of this paper was to systematically map genetic interactions for de novo fatty acid synthesis Jason Moffat is the corresponding author of the manuscript (j.moffat@utoronto.ca); Anne-Claude Gingras should be contacted for questions on this dataset (gingras@lunenfeld.ca). This submission is associated with 3 Supplementary Files (in addition to this README file) Table 1 describes the composition of this dataset Table 2 lists all the peptide identification evidence (as per iProphet) Table 3 lists the SAINTexpress interactions
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterGingras Lab
SpeciesList scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationListdeamidated L-asparagine; deamidated L-glutamine; L-methionine sulfoxide
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-02-25 06:58:25ID requested
12020-03-29 17:03:45announced
Publication List
no publication
Keyword List
submitter keyword: BioID, Proximity-dependent biotinylation, C12ORF49, Fatty acid synthesis
Contact List
Anne-Claude Gingras
contact affiliationLTRI
contact emailgingras@lunenfeld.ca
lab head
Gingras Lab
contact affiliationSamuel Lunenfeld Research Institute
contact emailgingras@mshri.on.ca
dataset submitter
Full Dataset Link List
MassIVE dataset URI
Dataset FTP location