PXD017659

PXD017659 is an original dataset announced via ProteomeXchange.

Title	A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating - RNA DIF-FRAC Xenopus laevis Animal Cap explants Replicate 1
Description	The associated files are mass spec data from size exclusion chromatographic separations of Xenopus laevis animal cap explants with and without RNAse A treatment.
HostingRepository	PRIDE
AnnounceDate	2020-03-10
AnnouncementXML	Submission_2021-01-06_06:49:06.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD017659
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Kevin Drew
SpeciesList	scientific name: Xenopus laevis (African clawed frog); NCBI TaxID: 8355;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2020-02-20 03:47:58	ID requested
1	2020-03-10 00:55:55	announced
⏵ 2	2021-01-06 06:49:07	announced	2021-01-06: Updated publication reference for PubMed record(s): 32898505.

Drew K, Lee C, Cox RM, Dang V, Devitt CC, McWhite CD, Papoulas O, Huizar RL, Marcotte EM, Wallingford JB, A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating machinery. Dev Biol, 467(1-2):108-117(2020) [pubmed]

submitter keyword: RNA DIF-FRAC, ribonucleoprotein complex, differential fractionation, Xenopus laevis, animal cap explant

Edward Marcotte
contact affiliation	Molecular Biosciences and the Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, TX USA
contact email	marcotte@austin.utexas.edu
lab head
Kevin Drew
contact affiliation	University of Texas at Austin
contact email	kdrew@utexas.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/03/PXD017659

PRIDE project URI

• PRIDE
  1. PXD017659
     1. Label: PRIDE project
     2. Name: A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating - RNA DIF-FRAC Xenopus laevis Animal Cap explants Replicate 1