PXD017535

PXD017535 is an original dataset announced via ProteomeXchange.

Title	Tandem mass tag labeling to characterize muscle-specific proteome change in beef during early postmortem
Description	Bovine longissimus lumborum (LL) and psoas major (PM) muscles biopsy samples were collected from four carcasses (n = 4) at 45 min, 12 h, and 36 h postmortem from a commercial beef processing facility. Proteome profile variation between beef LL and PM during the early postmortem period were evaluated by tandem mass tag labeling containing ten different isobaric compounds.
HostingRepository	PRIDE
AnnounceDate	2020-02-19
AnnouncementXML	Submission_2021-01-06_06:37:12.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD017535
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Chaoyu Zhai
SpeciesList	scientific name: Bos taurus (Bovine); NCBI TaxID: 9913;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; TMT6plex; Oxidation; monohydroxylated residue; Carbamidomethyl; iodoacetamide derivatized residue
Instrument	orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2020-02-17 01:21:12	ID requested
1	2020-02-19 01:56:57	announced
⏵ 2	2021-01-06 06:37:13	announced	2021-01-06: Updated publication reference for PubMed record(s): 32775575.

Zhai C, Djimsa BA, Brown K, Prenni JE, Woerner DR, Belk KE, Nair MN, Tandem mass tagged dataset used to characterize muscle-specific proteome changes in beef during early postmortem period. Data Brief, 32():106064(2020) [pubmed]

submitter keyword: TMT, muscle-to-meat conversion

Mahesh Narayanan Nair
contact affiliation	Department of Animal Sciences, Colorado State University
contact email	mnair@colostate.edu
lab head
Chaoyu Zhai
contact affiliation	Colorado State University
contact email	chaoyu.Zhai@colostate.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD017535

PRIDE project URI

• PRIDE
  1. PXD017535
     1. Label: PRIDE project
     2. Name: Tandem mass tag labeling to characterize muscle-specific proteome change in beef during early postmortem