PXD017294

PXD017294 is an original dataset announced via ProteomeXchange.

Title	Effects of retene, pyrene and phenanthrene on the cardiac proteome of the rainbow trout larva
Description	The mechanisms of cardiotoxicity of the three widespread model polycyclic aromatic hydrocarbons (PAHs) retene, pyrene and phenanthrene were explored in rainbow trout (Oncorhyncus mykiss) early life stages. Newly hatched larvae were exposed to sublethal doses of each individual PAH causing no detectable morphometric alterations. Changes in the cardiac proteome were assessed after 7 or 14 days of exposure to each PAH.
HostingRepository	PRIDE
AnnounceDate	2020-08-11
AnnouncementXML	Submission_2020-08-11_02:53:10.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Cyril Rigaud
SpeciesList	scientific name: Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri); NCBI TaxID: 8022;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2020-01-27 07:53:49	ID requested
⏵ 1	2020-08-11 02:53:11	announced

Rigaud C, Eriksson A, Rokka A, Skaugen M, Lihavainen J, Kein, ä, nen M, Lehtivuori H, Vehni, ä, inen ER, Retene, pyrene and phenanthrene cause distinct molecular-level changes in the cardiac tissue of rainbow trout (Oncorhynchus mykiss) larvae, part 2 - Proteomics and metabolomics. Sci Total Environ, 746():141161(2020) [pubmed]

curator keyword: Biological

submitter keyword: aquatic toxicology, cardiotoxicity, developmental toxicity, metabolomics, polycyclic aromatic hydrocarbons (PAHs), proteomics

Eeva-Riikka Vehniäinen
contact affiliation	University of Jyväskylä Department of Biological and Environmental Science
contact email	eeva-riikka.vehniainen@jyu.fi
lab head
Cyril Rigaud
contact affiliation	University of Jyväskylä Department of Biological and Environmental Science
contact email	cyril.c.rigaud@jyu.fi
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/08/PXD017294

PRIDE project URI

• PRIDE
  1. PXD017294
     1. Label: PRIDE project
     2. Name: Effects of retene, pyrene and phenanthrene on the cardiac proteome of the rainbow trout larva