PXD017288

PXD017288 is an original dataset announced via ProteomeXchange.

Title	Identification of OmpA in Acinetobacter sp. SA01 and its expression assessment
Description	Members of the genus Acinetobacter drag attention due to their importance in microbial pathology and biotechnology. OmpA is a porin with multifaceted functions in different species of Acinetobacter. In this study we identified this protein in Acinetobacter sp. SA01, an efficient phenol degrader strain, in different cellular and sub-cellular compartments (such as OM, OMV, biofilm and extracellular environment). Differential expression of proteins, including OmpA, under two conditions of phenol and ethanol supplementation was assessed using shotgun proteomics.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:16:48.057.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shahab Shahryari
SpeciesList	scientific name: Acinetobacter sp. SA01; NCBI TaxID: 1862567;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2020-01-27 02:21:41	ID requested
1	2020-12-17 02:31:23	announced
⏵ 2	2024-10-22 05:16:48	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

submitter keyword: proteomics, shotgun proteomics,OmpA, outer membrane (OM), outer membrane vesicle (OMV), biofilm

Kambiz Akbari Noghabi
contact affiliation	National Institute of Genetic Engineering and Biotechnology
contact email	akbari@nigeb.ac.ir
lab head
Shahab Shahryari
contact affiliation	National Institute of Genetic Engineering and Biotechnology
contact email	s_shahryari@nigeb.ac.ir
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD017288
     1. Label: PRIDE project
     2. Name: Identification of OmpA in Acinetobacter sp. SA01 and its expression assessment