PXD017160

PXD017160 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Plasma membrane proteomics .
Description	Aluminum (Al) toxicity in acid soil is a worldwide agricultural problem that inhibits crop growth and productivity. However, the signal pathways associated with Al tolerance in plants still remain largely unclear. In this study, tandem mass tag (TMT)-based quantitative proteomic methods was used to identify the expression changes of plasma membrane (PM) proteins in Tamba black soybean (TBS) root tips under Al stress. The results showed that a total of 907 PM proteins were identified, and 90 differentially expressed proteins (DEPs) were disclosed between Al-treated and untreated plants, with 46 up-regulated and 44 down-regulated (fold change > 1.3 or < 0.77, P < 0.05). Functional enrichment based on GO, KEGG and protein domain revealed that the DEPs were associated with membrane trafficking and transporters, modifying cell wall composition, defense response and signal transduction.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:04:06.682.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	yunmin wei
SpeciesList	scientific name: Glycine max; NCBI TaxID: 3847;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-01-17 03:45:46	ID requested
1	2020-06-25 02:02:21	announced
2	2020-08-11 05:50:38	announced	2020-08-11: Updated publication reference for PubMed record(s): 32566407.
⏵ 3	2024-10-22 05:04:14	announced	2024-10-22: Updated project metadata.

Publication List

Wei Y, Jiang C, Han R, Xie Y, Liu L, Yu Y, Plasma membrane proteomic analysis by TMT-PRM provides insight into mechanisms of aluminum resistance in tamba black soybean roots tips. PeerJ, 8():e9312(2020) [pubmed]
10.7717/peerj.9312;

Wei Y, Jiang C, Han R, Xie Y, Liu L, Yu Y, Plasma membrane proteomic analysis by TMT-PRM provides insight into mechanisms of aluminum resistance in tamba black soybean roots tips. PeerJ, 8():e9312(2020) [pubmed]

10.7717/peerj.9312;

Keyword List

submitter keyword: Aluminum resistance, Plasma membrane, TMT, PRM, TBS, Proteomics

submitter keyword: Aluminum resistance, Plasma membrane, TMT, PRM, TBS, Proteomics

Contact List

Yongxiong Yu
contact affiliation	Southwest University
contact email	yuyongxiong8@126.com
lab head
yunmin wei
contact affiliation	Southwest University
contact email	weiym1024@163.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD017160
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD017160

PRIDE project URI

Repository Record List

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