PXD017160 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Plasma membrane proteomics . |
Description | Aluminum (Al) toxicity in acid soil is a worldwide agricultural problem that inhibits crop growth and productivity. However, the signal pathways associated with Al tolerance in plants still remain largely unclear. In this study, tandem mass tag (TMT)-based quantitative proteomic methods was used to identify the expression changes of plasma membrane (PM) proteins in Tamba black soybean (TBS) root tips under Al stress. The results showed that a total of 907 PM proteins were identified, and 90 differentially expressed proteins (DEPs) were disclosed between Al-treated and untreated plants, with 46 up-regulated and 44 down-regulated (fold change > 1.3 or < 0.77, P < 0.05). Functional enrichment based on GO, KEGG and protein domain revealed that the DEPs were associated with membrane trafficking and transporters, modifying cell wall composition, defense response and signal transduction. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:04:06.682.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | yunmin wei |
SpeciesList | scientific name: Glycine max; NCBI TaxID: 3847; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-01-17 03:45:46 | ID requested | |
1 | 2020-06-25 02:02:21 | announced | |
2 | 2020-08-11 05:50:38 | announced | 2020-08-11: Updated publication reference for PubMed record(s): 32566407. |
⏵ 3 | 2024-10-22 05:04:14 | announced | 2024-10-22: Updated project metadata. |
Publication List
Wei Y, Jiang C, Han R, Xie Y, Liu L, Yu Y, Plasma membrane proteomic analysis by TMT-PRM provides insight into mechanisms of aluminum resistance in tamba black soybean roots tips. PeerJ, 8():e9312(2020) [pubmed] |
10.7717/peerj.9312; |
Keyword List
submitter keyword: Aluminum resistance, Plasma membrane, TMT, PRM, TBS, Proteomics |
Contact List
Yongxiong Yu |
contact affiliation | Southwest University |
contact email | yuyongxiong8@126.com |
lab head | |
yunmin wei |
contact affiliation | Southwest University |
contact email | weiym1024@163.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD017160
- Label: PRIDE project
- Name: Plasma membrane proteomics