PXD017157

PXD017157 is an original dataset announced via ProteomeXchange.

Title	Proteome of the fungus Phoma macdonaldii, the causal agent of black stem in sunflower
Description	Phoma macdonaldii causes black stem in sunflower, which severely affects both the yield and quality of sunflowers including weight and oil content of seeds. In this study, a global proteomic analysis of P. macdonaldii was performed in order to facilitate a better understand of the biological and pathogenic characteristics of this fungus. A total of 1,498 proteins were identified by LC-MS/MS in all biological replicates. The identified proteins were classified into functional categories, which included biological process, cellular components and molecular function (GO analysis), metabolism, genetic information progressing, environmental information progressing, cellular processes and organismal systems (KEGG). In addition, the expression of eight genes associated with fungal development and pathogenicity was further investigated. To the best of our knowledge, this is the first study to characterize the proteome of P. macdonaldii. Results from this study provide novel insights into fungal development and pathogenesis of P. macdonaldii and, perhaps even other Phoma species and may contribute to an enhanced understanding the sunflower and P. macdonaldii pathosystem
HostingRepository	iProX
AnnounceDate	2020-01-17
AnnouncementXML	Submission_2023-08-27_21:01:42.970.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yue Liang
SpeciesList	scientific name: Plenodomus lindquistii; NCBI TaxID: 301713;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2020-01-16 23:07:46	ID requested
⏵ 1	2023-08-27 21:01:45	announced

Sun H, Kav NNV, Liang Y, Sun L, Chen W, Proteome of the fungus Phoma macdonaldii, the causal agent of black stem of sunflower. J Proteomics, 225():103878(2020) [pubmed]

submitter keyword: Phoma macdonaldii, Fungal pathogen, Proteome, Sunflower

Yue Liang
contact affiliation	Collage of Plant Protection, Shenyang Agricultural University
contact email	liangyuet@126.com
lab head
Yue Liang
contact affiliation	Collage of Plant Protection, Shenyang Agricultural University
contact email	liangyuet@126.com
dataset submitter

iProX dataset URI