PXD017123

PXD017123 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics analysis of egg chorion from wt and Larp6 knockout zebrafish.
Description	The protein content of fertilised egg chorions, from larp6a-/-, larp6b-/-, and larp6a-/-;larp6b-/- mutant female zebrafish crossed with mutant males to create maternal zygotic (MZ) mutant lays, were analysed by LC-MS/MS. Three independent biological replicates were analysed per genotype, and Maqxuant label-free quantification (LFQ) was employed to quantify changes in the protein contents.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:59:02.001.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Maria Dermit Salazar
SpeciesList	scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-01-15 05:45:48	ID requested
1	2020-02-12 05:15:28	announced
⏵ 2	2024-10-22 04:59:02	announced	2024-10-22: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Label-free quantification, zona pellucida, Maxquant,Danio rerio, chorion, larp6, LC-MS/MS, Q-exactive plus, DDA

submitter keyword: Label-free quantification, zona pellucida, Maxquant,Danio rerio, chorion, larp6, LC-MS/MS, Q-exactive plus, DDA

Contact List

Faraz Mardakheh
contact affiliation	Barts Cancer Institute, Queen Mary University of London, Charterhouse square, London EC1M 6BQ.
contact email	f.mardakheh@qmul.ac.uk
lab head
Maria Dermit Salazar
contact affiliation	qmul
contact email	mariaprideproteomics@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD017123
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD017123

PRIDE project URI

Repository Record List

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