PXD017123 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomics analysis of egg chorion from wt and Larp6 knockout zebrafish. |
Description | The protein content of fertilised egg chorions, from larp6a-/-, larp6b-/-, and larp6a-/-;larp6b-/- mutant female zebrafish crossed with mutant males to create maternal zygotic (MZ) mutant lays, were analysed by LC-MS/MS. Three independent biological replicates were analysed per genotype, and Maqxuant label-free quantification (LFQ) was employed to quantify changes in the protein contents. |
HostingRepository | PRIDE |
AnnounceDate | 2020-02-12 |
AnnouncementXML | Submission_2020-02-12_05:15:27.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Maria Dermit Salazar |
SpeciesList | scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive Plus |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-01-15 05:45:48 | ID requested | |
⏵ 1 | 2020-02-12 05:15:28 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Danio rerio, chorion, larp6, zona pellucida, LC-MS/MS, Q-exactive plus, DDA, Maxquant, Label-free quantification |
Contact List
Faraz Mardakheh |
contact affiliation | Barts Cancer Institute, Queen Mary University of London, Charterhouse square, London EC1M 6BQ. |
contact email | f.mardakheh@qmul.ac.uk |
lab head | |
Maria Dermit Salazar |
contact affiliation | qmul |
contact email | mariaprideproteomics@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD017123 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD017123
- Label: PRIDE project
- Name: Proteomics analysis of egg chorion from wt and Larp6 knockout zebrafish.