PXD016988

PXD016988 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Identification of Stress Granule interactor proteins in yeast S. cerevisiae
Description	We investigated the sub-cellular architecture of Stress Granules in the context of glucose starvation. In order to uncover transient and peripheral Stress Granule interactors, we optimized the proximity-dependent biotinylation (BioID) approach for use in yeast. This approach allowed us to visualize Stress Granule formation while simultaneously inducing the biotinylation of SG components and nearby proteins in live cells. We used two independent Stress Granule components Pub1 and Pab1.
HostingRepository	PRIDE
AnnounceDate	2020-03-23
AnnouncementXML	Submission_2020-03-22_23:35:16.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Triana Amen
SpeciesList	scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-01-07 05:55:21	ID requested
⏵ 1	2020-03-22 23:35:17	announced

Publication List

Amen T, Kaganovich D, Stress granules sense metabolic stress at the plasma membrane and potentiate recovery by storing active Pkc1. Sci Signal, 13(623):(2020) [pubmed]

Amen T, Kaganovich D, Stress granules sense metabolic stress at the plasma membrane and potentiate recovery by storing active Pkc1. Sci Signal, 13(623):(2020) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Stress Granule, Pab1, Pub1, BioID

curator keyword: Biological

submitter keyword: Stress Granule, Pab1, Pub1, BioID

Contact List

Daniel Kaganovich
contact affiliation	Department of Experimental Neurodegeneration, University Medical Center Goettingen, Germany
contact email	danielkaganovich@gmail.com
lab head
Triana Amen
contact affiliation	University Medical Center Goettingen
contact email	amentri@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/03/PXD016988
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/03/PXD016988

PRIDE project URI

Repository Record List

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