PXD016798

PXD016798 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis of Acinetobacter baylyi ADP1 under exposure of non-antibiotic pharmaceuticals
Description	The goals of this study are to use SWATH-MS to detect bacterial proteomic profiles of wild-type Acinetobacter baylyi ADP1, and its protein response under the exposure of non-antibiotic pharmaceuticals, including ibuprofen, naproxen, gemfibrozil, diclofenac, propanolol, and iopromide. The concentrations were 0.5 mg/L for ibuprofen, naproxen, gemfibrozil, diclofenac, propanolol, and 1.0 mg/L for iopromide. The group without dosing pharmaceutical was the control group. Each concentration was conducted in triplicate. By comparing the proteomic profiles of experimental groups and control group, the effects of non-antibiotic pharmaceuticals on translational levels can be revealed.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:06:16.457.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jianhua Guo
SpeciesList	scientific name: Acinetobacter sp.; NCBI TaxID: 472;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2019-12-17 02:12:32	ID requested
1	2020-05-27 02:27:30	announced
⏵ 2	2024-10-22 05:06:17	announced	2024-10-22: Updated project metadata.

10.1038/s41396-020-0679-2;

Wang Y, Lu J, Engelst, ä, dter J, Zhang S, Ding P, Mao L, Yuan Z, Bond PL, Guo J, Non-antibiotic pharmaceuticals enhance the transmission of exogenous antibiotic resistance genes through bacterial transformation. ISME J, 14(8):2179-2196(2020) [pubmed]

submitter keyword: bacteria, non-antibiotic pharmaceuticals, SWATH-MS, Acinetobacter baylyi ADP1

Jianhua Guo
contact affiliation	Advanced Water Management Centre, The University of Queensland, Australia
contact email	j.guo@awmc.uq.edu.au
lab head
Jianhua Guo
contact affiliation	University of Queensland
contact email	j.guo@awmc.uq.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD016798

PRIDE project URI

• PRIDE
  1. PXD016798
     1. Label: PRIDE project
     2. Name: Proteomic analysis of Acinetobacter baylyi ADP1 under exposure of non-antibiotic pharmaceuticals