PXD016745

PXD016745 is an original dataset announced via ProteomeXchange.

Title	Community-intrinsic properties enhance keratin degradation from bacterial consortia
Description	We studied the microbial community-based degradation of keratin, a recalcitrant biological material, by four well-characterized synergistic soil isolates, which have previously been shown to display synergistic interactions during biofilm formation; Stenotrophomonas rhizophila, Xanthomonas retroflexus, Microbacterium oxydans and Paenibacillus amylolyticus. We observed enhanced keratin weight loss in cultures with X. retroflexus, both in dual and four-species co-cultures, as compared to expected keratin degradation by X. retroflexus alone. To unravel the degradation shotgun-proteomics was performed on the secretome of all culture types including X. retroflexus.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:00:22.645.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jakob Herschend
SpeciesList	scientific name: Xanthomonas retroflexus; NCBI TaxID: 305959;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-12-13 08:23:28	ID requested
1	2020-02-18 04:24:47	announced
⏵ 2	2024-10-22 05:00:28	announced	2024-10-22: Updated project metadata.

10.1371/journal.pone.0228108;

Nasipuri P, Herschend J, Brejnrod AD, Madsen JS, Espersen R, Svensson B, Burm, ø, lle M, Jacquiod S, S, ø, rensen SJ, Community-intrinsic properties enhance keratin degradation from bacterial consortia. PLoS One, 15(1):e0228108(2020) [pubmed]

submitter keyword: keratin degradation, inter-species interactions, bacteria, community

Søren J. Sørensen
contact affiliation	University of Copenhagen Department of Biology Section of Microbiology Universitetsparken 15, building 1 2100 Copenhagen
contact email	sjs@bio.ku.dk
lab head
Jakob Herschend
contact affiliation	University of Copenhagen
contact email	jakob.herschend@bio.ku.dk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD016745

PRIDE project URI

• PRIDE
  1. PXD016745
     1. Label: PRIDE project
     2. Name: Community-intrinsic properties enhance keratin degradation from bacterial consortia