PXD016655

PXD016655 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics analysis of novel serum protein biomarkers for the diagnosis of trastuzumab-resistant breast cancer
Description	we executed a study of serum proteome differences between trastuzumab-resistance and trastuzumab-response HER2-positive breast cancer patients using an isobaric TMT label-based multiplexed quantitative proteomic method in combination with a comprehensive functional bioinformatics analysis. An LC-MS/MS-based multiple/selective reaction monitoring (MRM/SRM) quantification method was applied to validate several candidate biomarkers.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:36:50.252.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ting Yang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-12-09 01:37:30	ID requested
1	2022-05-25 03:14:20	announced
⏵ 2	2024-10-22 05:36:51	announced	2024-10-22: Updated project metadata.

Publication List

Chantada-V, á, zquez MDP, Conde-Amboage M, Gra, ñ, a-L, ó, pez L, V, á, zquez-Est, é, vez S, Bravo SB, N, ú, ñ, ez C, Circulating Proteins Associated with Response and Resistance to Neoadjuvant Chemotherapy in HER2-Positive Breast Cancer. Cancers (Basel), 14(4):(2022) [pubmed]
10.3390/cancers14041087;

Chantada-V, á, zquez MDP, Conde-Amboage M, Gra, ñ, a-L, ó, pez L, V, á, zquez-Est, é, vez S, Bravo SB, N, ú, ñ, ez C, Circulating Proteins Associated with Response and Resistance to Neoadjuvant Chemotherapy in HER2-Positive Breast Cancer. Cancers (Basel), 14(4):(2022) [pubmed]

10.3390/cancers14041087;

Keyword List

ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project
submitter keyword: Human, breast cancer, serum

ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: Human, breast cancer, serum

Contact List

Ting Yang
contact affiliation	Nanjing Drum Tower Hospital
contact email	yangting@njglyy.com
lab head
Ting Yang
contact affiliation	Nanjing Drum Tower Hospital
contact email	617715968@qq.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD016655
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD016655

PRIDE project URI

Repository Record List

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