PXD016597

PXD016597 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Peptide artificial formylation in bottom–up proteomics analyses
Description	The primary objective of this study was to explain excessive formylation rate of peptides that did not come in contact with concentrated formic acid.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:07:04.379.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Juraj Lenco
SpeciesList	scientific name: Francisella tularensis subsp. holarctica; NCBI TaxID: 119857;
ModificationList	O-formyl-L-threonine; O-formyl-L-serine; N-formyl-L-methionine (Met)
Instrument	Q Exactive HF-X

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-12-04 06:35:06	ID requested
1	2020-06-10 04:42:47	announced
⏵ 2	2024-10-22 05:07:05	announced	2024-10-22: Updated project metadata.

Publication List

10.1021/acs.jproteome.9b00823;
Len, č, o J, Khalikova MA, Š, vec F, Dissolving Peptides in 0.1% Formic Acid Brings Risk of Artificial Formylation. J Proteome Res, 19(3):993-999(2020) [pubmed]

10.1021/acs.jproteome.9b00823;

Len, č, o J, Khalikova MA, Š, vec F, Dissolving Peptides in 0.1% Formic Acid Brings Risk of Artificial Formylation. J Proteome Res, 19(3):993-999(2020) [pubmed]

Keyword List

submitter keyword: Bottom–up proteomics, Formic acid, Peptide formylationArtificial modifications
Bottom–up proteomics
Formic acid
Peptide formylation,Artificial modifications

submitter keyword: Bottom–up proteomics, Formic acid, Peptide formylationArtificial modifications

Bottom–up proteomics

Formic acid

Peptide formylation,Artificial modifications

Contact List

Juraj Lenco, Ph.D.
contact affiliation	Charles University, Faculty of Pharmacy in Hradec Králové Department of Analytical Chemistry Akademika Heyrovského 1203/8 500 05 Hradec Králové, Czech Republic
contact email	lenco@faf.cuni.cz
lab head
Juraj Lenco
contact affiliation	Faculty of Pharmacy, Charles University
contact email	lenco@faf.cuni.cz
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD016597
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD016597

PRIDE project URI

Repository Record List

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