PXD016597 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Peptide artificial formylation in bottom–up proteomics analyses |
Description | The primary objective of this study was to explain excessive formylation rate of peptides that did not come in contact with concentrated formic acid. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:07:04.379.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Juraj Lenco |
SpeciesList | scientific name: Francisella tularensis subsp. holarctica; NCBI TaxID: 119857; |
ModificationList | O-formyl-L-threonine; O-formyl-L-serine; N-formyl-L-methionine (Met) |
Instrument | Q Exactive HF-X |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-12-04 06:35:06 | ID requested | |
1 | 2020-06-10 04:42:47 | announced | |
⏵ 2 | 2024-10-22 05:07:05 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1021/acs.jproteome.9b00823; |
Len, č, o J, Khalikova MA, Š, vec F, Dissolving Peptides in 0.1% Formic Acid Brings Risk of Artificial Formylation. J Proteome Res, 19(3):993-999(2020) [pubmed] |
Keyword List
submitter keyword: Bottom–up proteomics, Formic acid, Peptide formylationArtificial modifications |
Bottom–up proteomics |
Formic acid |
Peptide formylation,Artificial modifications |
Contact List
Juraj Lenco, Ph.D. |
contact affiliation | Charles University, Faculty of Pharmacy in Hradec Králové Department of Analytical Chemistry Akademika Heyrovského 1203/8 500 05 Hradec Králové, Czech Republic |
contact email | lenco@faf.cuni.cz |
lab head | |
Juraj Lenco |
contact affiliation | Faculty of Pharmacy, Charles University |
contact email | lenco@faf.cuni.cz |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD016597 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD016597
- Label: PRIDE project
- Name: Peptide artificial formylation in bottom–up proteomics analyses