PXD016386

PXD016386 is an original dataset announced via ProteomeXchange.

Title	Proteome wide measurements of protein half-lives in Mycoplasma pneumoniae
Description	We obtained proteome wide measurements of protein half-lives in M. pneumoniae by performing pulse-chase experiments following SILAC methods. We estimated degradation rates of individual proteins by measuring the increase in light protein compared to heavy protein labeling along the growth curve.
HostingRepository	PRIDE
AnnounceDate	2020-11-24
AnnouncementXML	Submission_2021-03-09_01:44:00.194.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Marc Weber
SpeciesList	scientific name: Mycoplasma pneumoniae M129; NCBI TaxID: 272634;
ModificationList	6x(13)C labeled residue; monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-21 14:07:42	ID requested
1	2020-11-23 23:09:35	announced
⏵ 2	2021-03-09 01:44:01	announced	2021-03-09: Updated publication reference for PubMed record(s): 33320415.

Burgos R, Weber M, Martinez S, Lluch-Senar M, Serrano L, Protein quality control and regulated proteolysis in the genome-reduced organism Mycoplasma pneumoniae. Mol Syst Biol, 16(12):e9530(2020) [pubmed]

submitter keyword: SILAC, protein half-life, degradation rates

Luis Serrano
contact affiliation	Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain
contact email	luis.serrano@crg.eu
lab head
Marc Weber
contact affiliation	Centre for Genomic Regulation
contact email	marc.weber@crg.eu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/11/PXD016386

PRIDE project URI

• PRIDE
  1. PXD016386
     1. Label: PRIDE project
     2. Name: Proteome wide measurements of protein half-lives in Mycoplasma pneumoniae