PXD016369

PXD016369 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Purification of ubiquitylated proteins from HCT116 cells
Description	By hyperosmotic stimuli, a slight increase in the level of ubiquitylated proteins was observed. So we tried to identify the di-Gly peptides.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:00:32.980.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hikaru Tsuchiya
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	methylthiolated residue; ubiquitination signature dipeptidyl lysine; monohydroxylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-20 08:22:46	ID requested
1	2020-02-18 01:11:13	announced
⏵ 2	2024-10-22 05:00:33	announced	2024-10-22: Updated project metadata.

Publication List

Yasuda S, Tsuchiya H, Kaiho A, Guo Q, Ikeuchi K, Endo A, Arai N, Ohtake F, Murata S, Inada T, Baumeister W, Fern, á, ndez-Busnadiego R, Tanaka K, Saeki Y, Stress- and ubiquitylation-dependent phase separation of the proteasome. Nature, 578(7794):296-300(2020) [pubmed]
10.1038/s41586-020-1982-9;

Yasuda S, Tsuchiya H, Kaiho A, Guo Q, Ikeuchi K, Endo A, Arai N, Ohtake F, Murata S, Inada T, Baumeister W, Fern, á, ndez-Busnadiego R, Tanaka K, Saeki Y, Stress- and ubiquitylation-dependent phase separation of the proteasome. Nature, 578(7794):296-300(2020) [pubmed]

10.1038/s41586-020-1982-9;

Keyword List

submitter keyword: ubiquitylated proteins, LC-MS/MS

submitter keyword: ubiquitylated proteins, LC-MS/MS

Contact List

Yasushi Saeki
contact affiliation	Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science
contact email	saeki-ys@igakuken.or.jp
lab head
Hikaru Tsuchiya
contact affiliation	okyo Metropolitan Institute of Medical Science
contact email	tsuchiya-hk@igakuken.or.jp
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD016369
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD016369

PRIDE project URI

Repository Record List

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