PXD016344

PXD016344 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Staphylococcus aureus surface LC-MS/MS analysis
Description	Staphylococcus aureus causes treatment-resistant infections, to which biofilm formation and bacterial persistence contribute greatly. This study aims at the large-scale characterization of mechanisms behind its prolonged persistence in hostile environments and capability to evade host defenses. We carried out the analysis of surface-exposed proteins in S. aureus biofilms prepared from two types of inocula; metabolically active, levofloxacin-susceptible culture and stationary phase, levofloxacin-tolerant culture. Age-synchronized planktonic control cultures provided a reference to facilitate the identification of growth mode-specific surface-expression patterns.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:59:00.741.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tuula Nyman
SpeciesList	scientific name: Staphylococcus aureus; NCBI TaxID: 1280;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-19 06:46:49	ID requested
1	2020-01-20 01:14:35	announced
⏵ 2	2024-10-22 04:59:04	announced	2024-10-22: Updated project metadata.

Publication List

Savijoki K, Miettinen I, Nyman TA, Kortesoja M, Hanski L, Varmanen P, Fallarero A, . Microorganisms, 8(1):(2020) [pubmed]
10.3390/microorganisms8010106;

Savijoki K, Miettinen I, Nyman TA, Kortesoja M, Hanski L, Varmanen P, Fallarero A, . Microorganisms, 8(1):(2020) [pubmed]

10.3390/microorganisms8010106;

Keyword List

submitter keyword: Surface, Biofilm, Bacteria, Aureus, Surfaceome,Staphylococcus, LC-MS/MS

submitter keyword: Surface, Biofilm, Bacteria, Aureus, Surfaceome,Staphylococcus, LC-MS/MS

Contact List

Tuula Nyman
contact affiliation	Head of Proteomics
contact email	tuula.nyman@medisin.uio.no
lab head
Tuula Nyman
contact affiliation	University of Oslo
contact email	tuula.nyman@medisin.uio.no
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/01/PXD016344
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/01/PXD016344

PRIDE project URI

Repository Record List

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