PXD016285

PXD016285 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomics analysis of microbial structure on the surface of Indian Ocean
Description	In this study we characterize microbial community features on the surface of Indian Ocean. 11 samples were collected from Indian Ocean and subjected for quantitative metaproteomics analysis for taxonomic and functional analysis. Our results suggested that metabolic tuning at metaproteomics levels enabled microbial community to sustain stable when subjected to environmental perturbations in the oligotrophic ocean.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:46:03.542.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	keqiang yan
SpeciesList	scientific name: phytoplankton environmental sample; NCBI TaxID: 1249885;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-15 01:36:37	ID requested
1	2023-05-10 09:50:44	announced
⏵ 2	2023-11-14 08:46:04	announced	2023-11-14: Updated project metadata.

Publication List

Xie ZX, Yan KQ, Kong LF, Gai YB, Jin T, He YB, Wang YY, Chen F, Lin L, Lin ZL, Xu HK, Shao ZZ, Liu SQ, Wang DZ, Metabolic tuning of a stable microbial community in the surface oligotrophic Indian Ocean revealed by integrated meta-omics. Mar Life Sci Technol, 4(2):277-290(2022) [pubmed]

Xie ZX, Yan KQ, Kong LF, Gai YB, Jin T, He YB, Wang YY, Chen F, Lin L, Lin ZL, Xu HK, Shao ZZ, Liu SQ, Wang DZ, Metabolic tuning of a stable microbial community in the surface oligotrophic Indian Ocean revealed by integrated meta-omics. Mar Life Sci Technol, 4(2):277-290(2022) [pubmed]

Keyword List

submitter keyword: DDA,metaproteomics,ocean microbial

submitter keyword: DDA,metaproteomics,ocean microbial

Contact List

Da-Zhi Wang
contact affiliation	Xiamen University
contact email	dzwang@xmu.edu.cn
lab head
keqiang yan
contact affiliation	BGI
contact email	yankeqiang@genomics.cn
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD016285
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD016285

PRIDE project URI

Repository Record List

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