PXD016243

PXD016243 is an original dataset announced via ProteomeXchange.

Title	The examination of Pseudomonas aeruginosa proteome in the presence of phenolic acids
Description	Pseudomonas aeruginosa, which is an important oppurtunistic pathogen, is a serious threat for human health, worldwide. New antimicrobial agents are in search and phenolic acids, secondary metabolites of plants, are promising candidates. In this project, the protein profile changes of Pseudomoas aeruginosa were determined after phenolic acid exposure by shot-gun proteomics. It was aimed to enlighten the antimicrobial action mechanism of subinhibitory concentrations of phenolic acids on pathogenic bacteria via proteomic approach.
HostingRepository	PRIDE
AnnounceDate	2020-08-27
AnnouncementXML	Submission_2020-08-27_01:12:00.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ozgun Oyku Ozdemir
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-12 02:45:37	ID requested
⏵ 1	2020-08-27 01:12:02	announced

Ozdemir OO, Soyer F, Presents Multiple Vital Changes in Its Proteome in the Presence of 3-Hydroxyphenylacetic Acid, a Promising Antimicrobial Agent. ACS Omega, 5(32):19938-19951(2020) [pubmed]

submitter keyword: Pseudomonas aeruginosa, phenolic acids, antimicrobial action mechanism, LC-ESI-MS/MS

Ferda Soyer Donmez
contact affiliation	Department of Molecular Biology and Genetics, Izmir Institute of Technology, Turkey
contact email	ferdasoyer@iyte.edu.tr
lab head
Ozgun Oyku Ozdemir
contact affiliation	Izmir Institute of Technology
contact email	ozgunoyku@gmail.com
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD016243
     1. Label: PRIDE project
     2. Name: The examination of Pseudomonas aeruginosa proteome in the presence of phenolic acids