PXD016113

PXD016113 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	System Suitability (CompRef) Study: Human-in-mouse xenograft breast cancer tumor samples
Description	The objective of the "System Suitability (CompRef) Study" was to validate mass spectrometry protocols used at each Proteome Characterization Center (PCC). Dataset imported into MassIVE from https://cptac-data-portal.georgetown.edu/cptac/s/S010 on 10/22/19
HostingRepository	MassIVE
AnnounceDate	2020-01-23
AnnouncementXML	Submission_2020-01-23_16:37:47.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Christopher Kinsinger
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; scientific name: Mus musculus; common name: house mouse; NCBI TaxID: 10090;
ModificationList	Carbamidomethyl; Oxidation; Acetyl; Carbamyl; Phospho; iTRAQ4plex
Instrument	Q Exactive; LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-01 08:05:34	ID requested
⏵ 1	2020-01-23 16:37:47	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: CPTAC

submitter keyword: CPTAC

Contact List

R. Reid Townsend
contact affiliation	Washington University in St. Louis
contact email	rtownsend@wustl.edu
lab head
Steven A. Carr
contact affiliation	Broad Institute of MIT and Harvard
contact email	scarr@broadinstitute.org
lab head
Richard Smith
contact affiliation	Pacific Northwest National Laboratory
contact email	dick.smith@pnnl.gov
lab head
Hui Zhang
contact affiliation	Associate Prosfessor, Johns Hopkins University, Department of Pathology Baltimore USA
contact email	hzhang32@jhmi.edu
lab head
Daniel C Liebler
contact affiliation	Vanderbilt University
contact email	daniel.liebler@Vanderbilt.Edu
lab head
Xian Chen
contact affiliation	University of North Carolina
contact email	xianc@email.unc.edu
lab head
Daniel Chan
contact affiliation	Johns Hopkins University
contact email	dchan@jhmi.edu
lab head
Christopher Kinsinger
contact affiliation	NIH/NCI
contact email	Christopher.kinsinger@nih.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000084497/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000084497/