PXD015643 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Translatome Hypoxia-Acidosis, TMT-pulse SILAC |
Description | Cells were grown in light (R0K0) SILAC media (AthenaES) for 7 days, they were then incubated in light media for 24 hours in respective condition (normoxia neutral (NN) pH: 7.4; hypoxia neutral (HN)1% O2, pH: 7.4; hypoxia acidosis (HA), 1% O2, pH=6) and pulsed with heavy (R10K8) SILAC media (AthenaES) for 16 hr (TMT-pSILAC) following treatment. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-08 |
AnnouncementXML | Submission_2024-10-08_11:36:03.877.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD015643 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Nathan Balukoff |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | Biotin:Sigma-B1267; Label:13C(6)15N(2); Label:13C(6)15N(4); TMT6plex; Oxidation; Acetyl; Carbamidomethyl |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-09-30 05:35:29 | ID requested | |
⏵ 1 | 2024-10-08 11:36:04 | announced | |
Publication List
Keyword List
ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project |
submitter keyword: U87-MG,TMT-pulse SILAC |
Contact List
Stephen Lee |
contact affiliation | Professor, Department of Biochemistry and Molecular Biology, University of Miami, Miller School of Medecine |
contact email | stephenlee@med.miami.edu |
lab head | |
Nathan Balukoff |
contact affiliation | University of Miami Miller School of Medicine |
contact email | nxb447@med.miami.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD015643 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD015643
- Label: PRIDE project
- Name: Translatome Hypoxia-Acidosis, TMT-pulse SILAC