PXD015508

PXD015508 is an original dataset announced via ProteomeXchange.

Title	Mass Spectrometry Analysis of Histone Modifications in Sorghum during Drought Acclimation
Description	This bottom-up analysis is the supplementary data file to the top-down analysis deposited with identifier PXD014660. The peptide data are used to support assignments of modifications detected in top-down. Details are described in the associated manuscript.
HostingRepository	PRIDE
AnnounceDate	2019-10-30
AnnouncementXML	Submission_2019-10-30_02:27:36.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Sorghum bicolor; NCBI TaxID: 4558;
ModificationList	phosphorylated residue; monohydroxylated residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2019-09-19 02:56:25	ID requested
⏵ 1	2019-10-30 02:27:38	announced

Zhou M, Malhan N, Ahkami AH, Engbrecht K, Myers G, Dahlberg J, Hollingsworth J, Sievert JA, Hutmacher R, Madera M, Lemaux PG, Hixson KK, Jansson C, Pa, š, a-Toli, ć L, Top-down mass spectrometry of histone modifications in sorghum reveals potential epigenetic markers for drought acclimation. Methods, 184():29-39(2020) [pubmed]

submitter keyword: epigenetics, mass spectrometry, plant, histone clipping, post-translational modifications

Ljiljana Pasa-Tolic
contact affiliation	Pacific Northwest National Laboratory, USA
contact email	ljiljana.pasatolic@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD015508

PRIDE project URI

• PRIDE
  1. PXD015508
     1. Label: PRIDE project
     2. Name: Mass Spectrometry Analysis of Histone Modifications in Sorghum during Drought Acclimation