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PXD015500

PXD015500 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleEstimation of relative biomasses in microbiota
DescriptionPresentation of a new methodology to assess microbiota relative quantifications in metaproteomics
HostingRepositoryPRIDE
AnnounceDate2020-05-26
AnnouncementXMLSubmission_2020-05-26_15:39:14.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterJean ARMENGAUD
SpeciesList scientific name: Shigella flexneri; NCBI TaxID: 623; scientific name: Eukaryota (eucaryotes); NCBI TaxID: 2759; scientific name: Archaea; NCBI TaxID: 2157; scientific name: Viruses; NCBI TaxID: 10239; scientific name: Salmonella bongori; NCBI TaxID: 54736; scientific name: Bacteria; NCBI TaxID: 2;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive HF; LTQ Orbitrap XL; Q Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02019-09-18 06:27:53ID requested
12020-05-26 15:39:14announced
Publication List
Pible O, Allain F, Jouffret V, Culotta K, Miotello G, Armengaud J, Estimating relative biomasses of organisms in microbiota using "phylopeptidomics". Microbiome, 8(1):30(2020) [pubmed]
Keyword List
submitter keyword: metaproteomics, bioinformatics, biomass, microbiota
Contact List
Jean Armengaud
contact affiliationCEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
contact emailjean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliationLi2D
contact emailjean.armengaud@cea.fr
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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