PXD015233 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Lysine fatty-acyl H3 peptide pulldown with HeLa SILAC nuclear extract |
Description | Histone H3 peptides with acyl modification on either K9 or K27 were used for peptide pull-down with stable isotope (light: K0R0, heavy: K8R10) labeled Hela nuclear extract. The acyl modifications are: acetyl (Ac), propionyl (Pro), Butanoyl (But), crotonyl (Cr), 3-hydroxy butanoyl (bHB), succinyl (Su), Pentanoyl (Vl), Hexanoyl (Xho) and Myristoyl (Myr). Each modified peptide is compared with an unmodified peptide with the same amino acid sequence. Both forward (unmodified-light, acyl-heavy) and reverse (unmodified-heavy, acyl-light) labeling and pull-down experiments were performed. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:57:11.885.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | John Coan |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-08-30 01:21:31 | ID requested | |
1 | 2019-10-02 03:51:14 | announced | |
2 | 2019-10-07 02:10:05 | announced | 2019-10-07: Updated publication reference for PubMed record(s): 31578417. |
⏵ 3 | 2024-10-22 04:57:12 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1038/s41598-019-50817-6; |
Li TM, Coan JP, Krajewski K, Zhang L, Elias JE, Strahl BD, Gozani O, Chua KF, Binding to medium and long chain fatty acyls is a common property of HEAT and ARM repeat modules. Sci Rep, 9(1):14226(2019) [pubmed] |
Keyword List
submitter keyword: Orbitrap Elite,Homo sapiens |
Contact List
Katrin Chua |
contact affiliation | 1Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA |
contact email | kfchua@stanford.edu |
lab head | |
John Coan |
contact affiliation | Stanford University |
contact email | jcoan@stanford.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD015233
- Label: PRIDE project
- Name: Lysine fatty-acyl H3 peptide pulldown with HeLa SILAC nuclear extract