PXD014986

PXD014986 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Effect of ATG5 depletion on virus infection
Description	Proteome analysis of wild-type and atg5-/- mouse embryonic fibroblasts infected with Japanese encephalitis virus
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:57:03.482.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Manjula Kalia
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Japanese encephalitis virus group; NCBI TaxID: NCBITaxon:11071;
ModificationList	iodoacetamide derivatized residue; deamidated residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-08-12 02:22:12	ID requested
1	2019-10-22 06:07:31	announced
2	2019-11-11 00:33:20	announced	2019-11-11: Updated publication reference for PubMed record(s): 31690592.
⏵ 3	2024-10-22 04:57:04	announced	2024-10-22: Updated project metadata.

Publication List

Sharma KB, Sharma M, Aggarwal S, Yadav AK, Bhatnagar S, Vrati S, Kalia M, -Deficient Mouse Embryonic Fibroblasts Reveals the Range of the Autophagy-Modulated Basal Cellular Proteome. mSystems, 4(6):(2019) [pubmed]
10.1128/msystems.00481-19;

Sharma KB, Sharma M, Aggarwal S, Yadav AK, Bhatnagar S, Vrati S, Kalia M, -Deficient Mouse Embryonic Fibroblasts Reveals the Range of the Autophagy-Modulated Basal Cellular Proteome. mSystems, 4(6):(2019) [pubmed]

10.1128/msystems.00481-19;

Keyword List

submitter keyword: ATG5, autophagy, Japanese encephalitis virus,Mouse embryonic fibroblasts

submitter keyword: ATG5, autophagy, Japanese encephalitis virus,Mouse embryonic fibroblasts

Contact List

Dr.Manjula Kalia
contact affiliation	Virology Lab
contact email	manjula@rcb.res.in
lab head
Manjula Kalia
contact affiliation	Regional Centre for Biotechnology
contact email	manjula@rcb.res.in
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD014986
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD014986

PRIDE project URI

Repository Record List

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