PXD014982

PXD014982 is an original dataset announced via ProteomeXchange.

Title	Light acclimation response of the thylakoid proteome in Arabidopsis
Description	The plant chloroplast thylakoid membrane must respond to environmental variations in light intensity to maximise the efficiency of photosynthesis and minimise photo-oxidative stress. Plants respond to changing light intensity in the short-term (seconds to minutes) through altered regulation of the structure and function of existing thylakoid components, whereas long-term acclimation (hours to days) involves changes in gene expression, protein synthesis and degradation, which modulate the composition of the thylakoid membrane. Here we have investigated the long-term changes in the thylakoid membrane composition in Arabidopsis thaliana plants acclimated to low, moderate and high light intensities using quantitative label-free proteomics in combination with a range of biochemical and spectroscopic functional analyses.
HostingRepository	PRIDE
AnnounceDate	2021-08-23
AnnouncementXML	Submission_2021-08-22_23:29:57.015.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sarah Flannery
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2019-08-12 02:06:10	ID requested
⏵ 1	2021-08-22 23:29:57	announced

Flannery SE, Hepworth C, Wood WHJ, Pastorelli F, Hunter CN, Dickman MJ, Jackson PJ, Johnson MP, Developmental acclimation of the thylakoid proteome to light intensity in Arabidopsis. Plant J, 105(1):223-244(2021) [pubmed]

submitter keyword: acclimation, thylakoid, photosynthesis, relative quantitation, label-free, iBAQ

Matthew P Johnson
contact affiliation	Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, U.K.
contact email	matt.johnson@sheffield.ac.uk
lab head
Sarah Flannery
contact affiliation	University of Sheffield
contact email	sflannery1@sheffield.ac.uk
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD014982
     1. Label: PRIDE project
     2. Name: Light acclimation response of the thylakoid proteome in Arabidopsis