PXD014739 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomic profiling of histone acetylation pattern in Arabidopsis |
Description | The levels of acetylated and non-acetylated histone peptide forms were quantified in A. thaliana plants with loss of function of HDA6, and plants exposed to HDAs inhibitors (trichostatin and sodium butyrate)during germination . |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-07 |
AnnouncementXML | Submission_2024-10-07_13:30:49.727.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Gabriela Lochmanova |
SpeciesList | scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702; |
ModificationList | monomethylated residue; acetylated residue; N6,N6-dimethyl-L-lysine; N6,N6,N6-trimethyl-L-lysine |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-07-24 08:03:07 | ID requested | |
⏵ 1 | 2024-10-07 13:30:50 | announced | |
Publication List
10.3390/ijms20205093; |
Lochmanov, á G, Ihnatov, á I, Kucha, ř, í, kov, á H, Brabencov, á S, Zachov, á D, Fajkus J, Zdr, á, hal Z, Fojtov, á M, Different Modes of Action of Genetic and Chemical Downregulation of Histone Deacetylases with Respect to Plant Development and Histone Modifications. Int J Mol Sci, 20(20):(2019) [pubmed] |
Keyword List
submitter keyword: Arabidopsis thaliana, histone, post-translational modifications, epigenetics, mass spectrometry, histone deacetylase inhibitor |
Contact List
Zbynek Zdrahal |
contact affiliation | Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic |
contact email | zdrahal@sci.muni.cz |
lab head | |
Gabriela Lochmanova |
contact affiliation | CEITEC-MU, Masaryk University, Brno |
contact email | g.lochmanova@seznam.cz |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD014739 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD014739
- Label: PRIDE project
- Name: Proteomic profiling of histone acetylation pattern in Arabidopsis